WormBase Tree Display for Gene: WBGene00056438

WBGene00056438 SMap: S_parent: Sequence: Crem_Contig34
  Identity: Version: 3
    Name: CGC_name: Cre-lin-41 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20781
      Molecular_name: CRE20781a
        CRE20781a.1
        RP45059
        CRE20781b
        RP50452
        CRE20781b.1
      Other_name: cr01.sctg6.wum.510
      Public_name: Cre-lin-41
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-lin-41
        3 03 Jul 2008 11:45:04 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE20781
                Other_name: cr01.sctg6.wum.510
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lin
    RNASeq_FPKM: WBls:0000004 67.7421 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        69.0766 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        70.4111 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 100.29 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        108.434 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        111.86 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        27.663 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        85.026 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        92.1471 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 14.0948 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.15313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.54317 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        6.93037 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 127.652 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        134.858 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        176.302 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.32862 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        4.39708 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.46495 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        66.0585 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        75.1671 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
      WBls:0000063 (12)
      WBls:0000101 47.7025 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        52.8987 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00151968
    Ortholog (29)
    Paralog: WBGene00055156 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066783 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00061672 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00061080 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064181 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00067276 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00071836 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075424 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00081162 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable zinc ion binding activity. Is an ortholog of C. elegans lin-41. In C. elegans, lin-41 is involved in several processes, including negative regulation of gene expression; regulation of developmental process; and reproductive process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE20781a
      CRE20781b
    Corresponding_transcript: CRE20781a.1
      CRE20781b.1
    Other_sequence: Dviv_isotig07939
      Dviv_isotig12438
      JI165183.1
      Acan_isotig20235
      Dviv_isotig07936
      Dviv_isotig07938
      Dviv_isotig07935
      Acan_isotig08095
      Oden_isotig18608
  Experimental_info: Expr_pattern: Expr1094172
    Microarray_results: GPL14146_CRE20781_2616-2675_0.867_20_B
      GPL14146_CRE20781_2728-2787_0.900_10_C
      GPL14146_CRE20781_3231-3290_0.947_1_A
  Reference: WBPaper00061333
  Method: Gene