WormBase Tree Display for Gene: WBGene00056411

WBGene00056411 SMap: S_parent: Sequence: Crem_Contig4
  Identity: Version: 3
    Name: CGC_name: Cre-tyr-5 From_analysis: Inferred_from_orthology
      Sequence_name: CRE28062
      Molecular_name: CRE28062
        CRE28062.1
        RP37488
      Other_name: cr01.sctg6.wum.483
      Public_name: Cre-tyr-5
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:04 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE28062
                Other_name: cr01.sctg6.wum.483
        3 29 Jan 2010 10:05:57 WBPerson2970 Name_change: CGC_name: Cre-tyr-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tyr
    RNASeq_FPKM: WBls:0000004 0.936323 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        1.14332 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.35032 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (41)
      WBls:0000027 0.116299 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0.232598 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0.521652 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        1.85401 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.344418 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        5.74775 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        8.42067 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        8.47815 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.516879 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.522931 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.576974 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        13.0828 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        13.829 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        25.5887 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        27.7849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        27.9835 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (11)
      WBls:0000101 1.14332 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        7.35459 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00151941
    Ortholog (27)
    Paralog: WBGene00055858 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00071827 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00071540 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066580 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00067040 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00058531 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00066133 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00069442 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075127 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity. Is an ortholog of C. elegans tyr-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE28062
    Corresponding_transcript: CRE28062.1
    Other_sequence: EX556816.1
      Acan_isotig14440
      ACC20509_1
      MAC02602_1
      Acan_isotig12450
      MA03233
      AE03357
  Experimental_info: Expr_pattern: Expr1099996
    Microarray_results: GPL14146_CRE28062_1113-1172_0.913_16_B
      GPL14146_CRE28062_1236-1295_0.785_130_A
      GPL14146_CRE28062_1378-1437_0.962_1_C
  Method: Gene