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WormBase Tree Display for Gene: WBGene00056053

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Name Class

WBGene00056053SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-ndc-80From_analysisInferred_from_orthology
Sequence_nameCRE28570
Molecular_nameCRE28570
CRE28570.1
RP13023
Other_namecr01.sctg6.wum.132
Public_nameCre-ndc-80
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:47WBPerson2970Name_changeCGC_nameCre-ndc-80
303 Jul 2008 11:45:01WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28570
Other_namecr01.sctg6.wum.132
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classndc
RNASeq_FPKMWBls:0000004264.206From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
267.578From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
270.951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002718.2269From_analysisRNASeq.remanei.WBls:0000027.control_mean
21.5016From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
22.4541From_analysisRNASeq.remanei.WBls:0000027.control_median
23.4067From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.3964From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
25.6028From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003813.9387From_analysisRNASeq.remanei.WBls:0000038.control_mean
18.2192From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
20.9836From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2.6132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041118.824From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
119.378From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
124.514From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
40.921From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
42.8292From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
44.9776From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
81.9008From_analysisRNASeq.remanei.WBls:0000041.control_median
81.9073From_analysisRNASeq.remanei.WBls:0000041.control_mean
WBls:0000063 (12)
WBls:000010121.5032From_analysisRNASeq.remanei.total_over_all_stages.control_median
51.2176From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00151567
00151568
Ortholog (24)
Structured_descriptionAutomated_descriptionPredicted to be involved in attachment of mitotic spindle microtubules to kinetochore. Predicted to be part of Ndc80 complex. Is an ortholog of C. elegans ndc-80. In C. elegans, ndc-80 is involved in several processes, including chromosome organization; gonad morphogenesis; and positive regulation of kinetochore assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28570
Corresponding_transcriptCRE28570.1
Other_sequenceCR01998
CBC04689_1
CR03902
CJC17913_1
CR04366
CRC01587_1
CJC07860_1
Experimental_infoExpr_patternExpr1095381
Microarray_resultsGPL14146_CRE28570_1311-1370_0.906_13_A
GPL14146_CRE28570_339-398_0.788_110_C
GPL14146_CRE28570_424-483_0.847_51_B
MethodGene