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WormBase Tree Display for Gene: WBGene00055981

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Name Class

WBGene00055981SMapS_parentSequenceCrem_Contig4
IdentityVersion2
NameSequence_nameCRE28618
Molecular_nameCRE28618
CRE28618.1
RP08932
Other_namecr01.sctg6.wum.62
Public_nameCRE28618
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:59WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28618
Other_namecr01.sctg6.wum.62
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040.077815From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.15563From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (28)
WBls:00000270.280728From_analysisRNASeq.remanei.WBls:0000027.control_median
0.305138From_analysisRNASeq.remanei.WBls:0000027.control_mean
0.561455From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
0.659096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.563559From_analysisRNASeq.remanei.WBls:0000038.control_mean
0.652338From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
1.03834From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000410.76182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0.786312From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.117From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.58768From_analysisRNASeq.remanei.WBls:0000041.control_median
1.83003From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.05837From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.85358From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
3.40313From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:00000630.085414From_analysisRNASeq.remanei.WBls:0000063.control_median
0.170828From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
0.57733From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.805758From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
1.32809From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
1.62229From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
1.84633From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
WBls:00001010.606897From_analysisRNASeq.remanei.total_over_all_stages.control_median
0.762322From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (12)
ParalogWBGene00055980Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00055984Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
GeneACeDB-Compara
WBGene00055985Caenorhabditis remaneiFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00055982Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00063699Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: RAI1-like family. Is an ortholog of C. elegans M01G12.14; M01G12.7; and M01G12.9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28618
Corresponding_transcriptCRE28618.1
Experimental_infoExpr_patternExpr1101071
Microarray_resultsGPL14146_CRE28618_237-296_0.913_25_A
MethodGene