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WormBase Tree Display for Gene: WBGene00055896

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Name Class

WBGene00055896SMapS_parentSequenceCrem_Contig12
IdentityVersion2
NameSequence_nameCRE04875
Molecular_nameCRE04875
CRE04875.1
RP20496
Other_namecr01.sctg5.wum.594
Public_nameCRE04875
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:59WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04875
Other_namecr01.sctg5.wum.594
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040.519735From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.03947From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002714.4473From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
30.9198From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
32.0016From_analysisRNASeq.remanei.WBls:0000027.control_mean
32.0047From_analysisRNASeq.remanei.WBls:0000027.control_median
33.0897From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
49.5496From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003818.1602From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
33.1206From_analysisRNASeq.remanei.WBls:0000038.control_mean
39.43From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
41.7716From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:0000041106.331From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
106.469From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
120.937From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
42.3361From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
42.5973From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
53.2491From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
78.6533From_analysisRNASeq.remanei.WBls:0000041.control_mean
79.79From_analysisRNASeq.remanei.WBls:0000041.control_median
WBls:0000063 (12)
WBls:000010149.0687From_analysisRNASeq.remanei.total_over_all_stages.control_median
53.6586From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00151415
Ortholog (34)
ParalogWBGene00080625Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00077379Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00056560Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00057824Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00057825Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00057950Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063084Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063366Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable catalytic activity. Is an ortholog of C. elegans Y48A6B.7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04875
Corresponding_transcriptCRE04875.1
Other_sequence (30)
Experimental_infoExpr_patternExpr1106116
Microarray_resultsGPL14146_CRE04875_388-447_0.927_11_B
GPL14146_CRE04875_440-499_0.966_1_A
GPL14146_CRE04875_99-158_0.914_18_C
MethodGene