WormBase Tree Display for Gene: WBGene00055846

WBGene00055846 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 3
    Name: CGC_name: Cre-dyf-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04848
      Molecular_name: CRE04848
        CRE04848.1
        RP39303
      Other_name: cr01.sctg5.wum.553
      Public_name: Cre-dyf-2.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:59 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04848
                Other_name: cr01.sctg5.wum.553
        3 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cre-dyf-2.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dyf
    RNASeq_FPKM: WBls:0000004 0.75904 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.959445 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.15985 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.083788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.67603 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.94618 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.25711 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.56803 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        4.10611 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.169685 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.2093 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        1.60137 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        1.85684 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.61651 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.65226 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.718411 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.41993 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.42075 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        4.12144 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        4.12517 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.29069 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.282192 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        0.369384 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0.432664 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.495944 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        0.837068 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.84505 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        1.17865 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        1.31479 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        3.88467 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
      WBls:0000101 0.802045 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.50562 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00151350
    Ortholog (52)
    Paralog: WBGene00055848 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in intraciliary retrograde transport. Is an ortholog of C. elegans dyf-2. In C. elegans, dyf-2 is involved in several processes, including chemotaxis; cilium organization; and olfactory behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04848
    Corresponding_transcript: CRE04848.1
    Other_sequence (12)
  Experimental_info: Expr_pattern: Expr1095645
    Microarray_results: GPL14146_CRE04848_1604-1663_0.587_252_C
      GPL14146_CRE04848_1708-1767_0.938_7_A
      GPL14146_CRE04848_1854-1913_0.904_13_B
  Method: Gene