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WormBase Tree Display for Gene: WBGene00055771

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Name Class

WBGene00055771SMapS_parentSequenceCrem_Contig12
IdentityVersion4
NameCGC_nameCre-unc-49From_analysisInferred_from_orthology
Sequence_nameCRE04814
Molecular_nameCRE04814
CRE04814.1
RP39028
Other_namecr01.sctg5.wum.480
cr01.sctg5.wum.480.2
Public_nameCre-unc-49
SpeciesCaenorhabditis remanei
HistoryVersion_change (4)
Acquires_mergeWBGene00055772
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000040.620128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.851264From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.0824From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.5483From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.09683From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
15.6689From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
6.71136From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
8.50635From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.62983From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:00000380.34707From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
13.0957From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
7.78444From_analysisRNASeq.remanei.WBls:0000038.control_mean
9.91056From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:00000411.64014From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.85953From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.5634From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
3.0288From_analysisRNASeq.remanei.WBls:0000041.control_median
3.38767From_analysisRNASeq.remanei.WBls:0000041.control_mean
3.49419From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
5.2642From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
5.50458From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001013.17234From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.35437From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation (6)
Ortholog (35)
Paralog (122)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (3)
Experimental_infoExpr_patternExpr1107557
Microarray_resultsGPL14146_CRE04814_1792-1851_0.855_46_C
GPL14146_CRE04814_1884-1943_0.898_13_A
GPL14146_CRE04814_720-779_0.815_78_B
MethodGene