WormBase Tree Display for Gene: WBGene00055742

WBGene00055742 SMap: S_parent: Sequence: Crem_Contig12
  Identity: Version: 3
    Name: CGC_name: Cre-spp-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04794
      Molecular_name: CRE04794
        CRE04794.1
        RP02290
      Other_name: cr01.sctg5.wum.453
      Public_name: Cre-spp-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-spp-1
        3 03 Jul 2008 11:44:58 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04794
                Other_name: cr01.sctg5.wum.453
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spp
    RNASeq_FPKM: WBls:0000004 1.16823 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        1.30196 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.4357 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 113.649 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        6.66803 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        75.687 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        83.0712 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        91.2154 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        99.3597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 10.1279 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        204.338 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        282.774 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        320.112 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 194.972 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        217.545 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        261.709 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        395.272 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        406.315 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        528.835 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        590.456 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        644.374 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 206.258 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        238.259 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (23)
    Paralog: WBGene00052909 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Saposin B type domain and Saposin-like. Is an ortholog of C. elegans spp-1. In C. elegans, spp-1 is involved in defense response to other organism and pore formation in membrane of another organism. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04794
    Corresponding_transcript: CRE04794.1
    Other_sequence: ES743710.1
      HBC09192_1
      CR10745
      CBC10698_1
      ES411784.1
      EX012494.1
      CRC07559_1
  Experimental_info: Expr_pattern: Expr1098589
    Microarray_results: GPL14146_CRE04794_40-99_0.920_1_A
  Method: Gene