WormBase Tree Display for Gene: WBGene00054117

WBGene00054117 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-vps-32.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26519
      Molecular_name: CRE26519
        CRE26519.1
        RP22678
      Other_name: cr01.sctg3.wum.137
      Public_name: Cre-vps-32.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-vps-32.1
        3 03 Jul 2008 11:44:47 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26519
                Other_name: cr01.sctg3.wum.137
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000004 192.147 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        195.564 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        198.981 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 16.3899 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        66.7647 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        70.5804 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        79.3311 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        88.0818 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        92.0069 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 104.673 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        107.327 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        25.5165 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        79.1722 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 104.722 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        123.537 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        124.785 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        126.745 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        127.439 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        128.134 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        128.765 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        136.808 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 104.698 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        98.4985 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149431
    Ortholog (37)
    Paralog: WBGene00054000 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053241 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062054 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vacuolar transport. Is an ortholog of C. elegans vps-32.1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26519
    Corresponding_transcript: CRE26519.1
    Other_sequence (85)
  Experimental_info: Expr_pattern: Expr1111154
    Microarray_results: GPL14146_CRE26519_464-523_0.945_1_B
      GPL14146_CRE26519_620-679_0.454_123_C
      GPL14146_CRE26519_711-770_0.701_64_A
  Method: Gene