WormBase Tree Display for Gene: WBGene00054080

WBGene00054080 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 3
    Name: CGC_name: Cre-nhr-22 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26280
      Molecular_name: CRE26280
        CRE26280.1
        RP29834
      Other_name: cr01.sctg3.wum.101
      Public_name: Cre-nhr-22
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-nhr-22
        3 03 Jul 2008 11:44:47 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26280
                Other_name: cr01.sctg3.wum.101
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 7.30293 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        8.17148 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        9.04003 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 1.06723 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3.1712 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5.1667 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        5.34305 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        7.51491 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.91344 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 1.86659 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        4.57392 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        5.56501 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        6.29015 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 19.4609 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        19.7655 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        30.0932 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        32.0873 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        32.11 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        7.5301 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        7.94363 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        8.82862 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 6.23972 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        8.6476 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149391
      00149392
      00149393
      00149394
    Ortholog (27)
    Paralog (250)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-22. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26280
    Corresponding_transcript: CRE26280.1
    Other_sequence: ES744626.1
      HBC13051_1
      Hbac_isotig06005
  Experimental_info: Expr_pattern: Expr1104159
    Microarray_results: GPL14146_CRE26280_1442-1501_0.930_5_B
      GPL14146_CRE26280_1528-1587_0.952_1_C
      GPL14146_CRE26280_1567-1626_0.934_3_A
  Method: Gene