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WormBase Tree Display for Gene: WBGene00053546

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Name Class

WBGene00053546SMapS_parentSequenceCrem_Contig1
IdentityVersion4
NameSequence_nameCRE01761
Molecular_nameCRE01761
CRE01761.1
RP31072
Other_namecr01.sctg2.wum.330
Cre-tag-180
Public_nameCRE01761
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-tag-180
303 Jul 2008 11:44:43WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01761
Other_namecr01.sctg2.wum.330
403 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040.386903From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0.495914From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.604925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.687787From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
3.63544From_analysisRNASeq.remanei.WBls:0000027.control_mean
3.75224From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
3.87996From_analysisRNASeq.remanei.WBls:0000027.control_median
4.00767From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
6.09408From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.895422From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.4357From_analysisRNASeq.remanei.WBls:0000038.control_mean
2.48926From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
3.92241From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.396091From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.605491From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.616361From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.05597From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.05938From_analysisRNASeq.remanei.WBls:0000041.control_median
1.50239From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.5553From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.66019From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001011.35344From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.61831From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00054774Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain. Is an ortholog of C. elegans tag-180.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01761
Corresponding_transcriptCRE01761.1
Other_sequenceJI166444.1
Hbac_isotig02497
JI227071.1
ACC14937_1
FC549697.1
FC550251.1
Experimental_infoExpr_patternExpr1102221
Microarray_resultsGPL14146_CRE01761_1296-1355_0.813_88_C
GPL14146_CRE01761_1710-1769_0.840_61_B
GPL14146_CRE01761_2252-2311_0.716_283_A
MethodGene