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WormBase Tree Display for Gene: WBGene00053508

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Name Class

WBGene00053508SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-rps-9From_analysisInferred_from_orthology
Sequence_nameCRE01779
Molecular_nameCRE01779
CRE01779.1
RP14774
Other_namecr01.sctg2.wum.292
Public_nameCre-rps-9
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-rps-9
303 Jul 2008 11:44:43WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01779
Other_namecr01.sctg2.wum.292
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrps
RNASeq_FPKMWBls:0000004252.986From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
269.085From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
285.183From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000275000.46From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
5347.16From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5427.27From_analysisRNASeq.remanei.WBls:0000027.control_mean
5442.15From_analysisRNASeq.remanei.WBls:0000027.control_median
5537.15From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5824.29From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000383000.02From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
3276.99From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
3459.46From_analysisRNASeq.remanei.WBls:0000038.control_mean
4101.36From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000412472.05From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2482.98From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
2597.85From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2774.45From_analysisRNASeq.remanei.WBls:0000041.control_median
2869.53From_analysisRNASeq.remanei.WBls:0000041.control_mean
2951.05From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
3124.67From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
3588.57From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:00001012958.56From_analysisRNASeq.remanei.total_over_all_stages.control_mean
2967.36From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00148726
00148727
00148728
00148729
00148730
Ortholog (29)
Structured_descriptionAutomated_descriptionPredicted to enable rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be part of small ribosomal subunit. Is an ortholog of C. elegans rps-9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01779
Corresponding_transcriptCRE01779.1
Other_sequence (323)
Experimental_infoExpr_patternExpr1113086
Microarray_resultsGPL14146_CRE01779_173-232_0.814_5_A
GPL14146_CRE01779_8-67_0.691_22_C
GPL14146_CRE01779_87-146_0.906_1_B
MethodGene