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WormBase Tree Display for Gene: WBGene00052450

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Name Class

WBGene00052450SMapS_parentSequenceCrem_Contig5
IdentityVersion3
NameCGC_nameCre-dpy-30From_analysisInferred_from_orthology
Sequence_nameCRE27063
Molecular_nameCRE27063
CRE27063.1
RP21179
Other_namecr01.sctg1.wum.326
Public_nameCre-dpy-30
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:34WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27063
Other_namecr01.sctg1.wum.326
304 Jul 2008 11:06:34WBPerson4055Name_changeCGC_nameCre-dpy-30
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:0000004425.329From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
446.93From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
468.531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027128.164From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
154.867From_analysisRNASeq.remanei.WBls:0000027.control_mean
155.98From_analysisRNASeq.remanei.WBls:0000027.control_median
183.797From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
227.56From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
79.9476From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038163.89From_analysisRNASeq.remanei.WBls:0000038.control_mean
174.131From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
227.941From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
89.5988From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041116.072From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
121.981From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
138.475From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
185.264From_analysisRNASeq.remanei.WBls:0000041.control_mean
186.585From_analysisRNASeq.remanei.WBls:0000041.control_median
234.694From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
249.789From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
250.573From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:0000101137.837From_analysisRNASeq.remanei.total_over_all_stages.control_median
171.329From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147703
Ortholog (30)
ParalogWBGene00069790Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00069791Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00080402Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be part of Set1C/COMPASS complex. Is an ortholog of C. elegans dpy-30. In C. elegans, dpy-30 is involved in several processes, including dosage compensation by hypoactivation of X chromosome; nematode male tail tip morphogenesis; and transdifferentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27063
Corresponding_transcriptCRE27063.1
Other_sequence (51)
Experimental_infoExpr_patternExpr1110160
Microarray_resultsGPL14146_CRE27063_146-205_0.764_11_C
GPL14146_CRE27063_186-245_0.820_2_B
GPL14146_CRE27063_328-387_0.934_1_A
MethodGene