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WormBase Tree Display for Gene: WBGene00051804

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Name Class

WBGene00051804SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-slcr-46.1From_analysisInferred_from_orthology
Sequence_nameCRE00798
Molecular_nameCRE00798
CRE00798.1
RP35332
Other_namecr01.sctg0.wum.792
Public_nameCre-slcr-46.1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:28WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00798
Other_namecr01.sctg0.wum.792
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCre-slcr-46.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classslcr
RNASeq_FPKMWBls:00000040.19919From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.219316From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.239442From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.964157From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
10.1657From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
10.2381From_analysisRNASeq.remanei.WBls:0000027.control_median
10.3106From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
13.7988From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
8.80981From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:000003812.1918From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
12.7872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2.68478From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
9.22126From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:00000417.28142From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
7.45302From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
8.32548From_analysisRNASeq.remanei.WBls:0000041.control_mean
8.53022From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
8.53656From_analysisRNASeq.remanei.WBls:0000041.control_median
8.54291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
8.85674From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
9.28858From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010110.7498From_analysisRNASeq.remanei.total_over_all_stages.control_median
9.82387From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147047
00147048
Ortholog (25)
ParalogWBGene00062864Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00063583Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064016Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075036Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans slcr-46.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00798
Corresponding_transcriptCRE00798.1
Other_sequenceAcan_isotig09608
ACC01239_1
Oden_isotig24839
HC01377
Tcir_isotig28489
Tcir_isotig13933
Tcir_isotig17284
HCC03792_1
Tcol_isotig13056
Experimental_infoExpr_patternExpr1107000
Microarray_resultsGPL14146_CRE00798_417-476_0.881_18_C
GPL14146_CRE00798_536-595_0.882_16_B
GPL14146_CRE00798_886-945_0.855_33_A
MethodGene