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WormBase Tree Display for Gene: WBGene00047784

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Name Class

WBGene00047784SMapS_parentSequenceC08F11
IdentityVersion1
NameCGC_name21ur-4710Person_evidenceWBPerson6396
Sequence_nameC08F11.39
Molecular_nameC08F11.39
Other_nameCELE_C08F11.39Accession_evidenceNDBBX284604
Public_name21ur-4710
DB_infoDatabaseNDBlocus_tagCELE_C08F11.39
NCBIgene13199088
RefSeqproteinNR_057018.1
RNAcentralURSidURS00001399F0
SpeciesCaenorhabditis elegans
HistoryVersion_change127 Jul 2007 11:38:03WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001638
Gene_class21ur
AlleleWBVar01498996
WBVar01499925
WBVar01499951
WBVar01499952
WBVar02151690
WBVar01499492
WBVar01499493
WBVar01498769
WBVar01500245
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by spt-16 and rnp-6 based on RNA-seq studies. Is affected by D-glucose based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptC08F11.39
Experimental_infoExpression_clusterWBPaper00051388:Glucose-diet_downregulated
WBPaper00055013:spt-16(RNAi)_downregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
Map_infoMapIVPosition10.5449
PositivePositive_cloneC08F11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028915
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene