WormBase Tree Display for Gene: WBGene00047270
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WBGene00047270 | SMap | S_parent | Sequence | C52D10 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | CGC_name | 21ur-2736 | Person_evidence | WBPerson6396 | ||||
Sequence_name | C52D10.28 | |||||||
Molecular_name | C52D10.28 | |||||||
Other_name | CELE_C52D10.28 | Accession_evidence | NDB | BX284604 | ||||
Public_name | 21ur-2736 | |||||||
DB_info | Database | NDB | locus_tag | CELE_C52D10.28 | ||||
NCBI | gene | 13210959 | ||||||
RefSeq | protein | NR_068318.1 | ||||||
RNAcentral | URSid | URS00005EBD14 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 27 Jul 2007 11:38:03 | WBPerson1847 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001638 | ||||||
Gene_class | 21ur | |||||||
Allele | WBVar01499527 | |||||||
WBVar01498996 | ||||||||
WBVar01498262 | ||||||||
WBVar01499925 | ||||||||
WBVar00974476 | ||||||||
WBVar01498676 | ||||||||
WBVar01498687 | ||||||||
WBVar01498341 | ||||||||
WBVar01500245 | ||||||||
RNASeq_FPKM (74) | ||||||||
Structured_description | Automated_description | Is affected by several genes including hpl-2; mrps-5; and hmg-4 based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_transcript | C52D10.28 | ||||||
Experimental_info | Expression_cluster | WBPaper00054493:hpl-2(tm1489)_upregulated | ||||||
WBPaper00055013:hmg-4(RNAi)_downregulated | ||||||||
WBPaper00055013:spt-16(RNAi)_downregulated | ||||||||
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA | ||||||||
Map_info | Map | IV | Position | 16.2411 | ||||
Positive | Positive_clone | C52D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Pseudo_map_position | ||||||||
Reference | WBPaper00028915 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |