WormBase Tree Display for Gene: WBGene00045302
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| WBGene00045302 | SMap | S_parent | Sequence | R07C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-30 | Person_evidence | WBPerson655 | |||||
| Sequence_name | R07C3.15 | ||||||||
| Molecular_name | R07C3.15 | ||||||||
| R07C3.15.1 | |||||||||
| CE40770 | |||||||||
| Other_name | CELE_R07C3.15 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-30 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00045302 | |||||
| NDB | locus_tag | CELE_R07C3.15 | |||||||
| NCBI | gene | 6418632 | |||||||
| RefSeq | protein | NM_001129156.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322489 | |||||||
| TrEMBL | UniProtAcc | A3KFE0 | |||||||
| UniProt_GCRP | UniProtAcc | A3KFE0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 01 Mar 2007 13:22:15 | WBPerson1867 | Event | Split_from | WBGene00019923 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-30 | ||||
| Split_from | WBGene00019923 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (75) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in ABalpppppa; ABpraaappa; and body wall muscle cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and mex-3 based on RNA-seq and microarray studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07C3.15 | |||||||
| Corresponding_transcript | R07C3.15.1 | ||||||||
| Associated_feature | WBsf643935 | ||||||||
| WBsf986523 | |||||||||
| WBsf986524 | |||||||||
| WBsf1011458 | |||||||||
| WBsf1011459 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034700 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1018745 | ||||||||
| Expr1040363 | |||||||||
| Expr1155140 | |||||||||
| Expr2011716 | |||||||||
| Expr2029955 | |||||||||
| Drives_construct | WBCnstr00023264 | ||||||||
| Construct_product | WBCnstr00023264 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (70) | |||||||||
| SAGE_tag | SAGE:caaagataaa | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| Map_info | Map | II | Position | -15.5864 | |||||
| Positive | Positive_clone | R07C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
