WormBase Tree Display for Gene: WBGene00045242
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| WBGene00045242 | SMap | S_parent | Sequence | C05B5 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | C05B5.11 | ||||||
| Molecular_name | C05B5.11 | |||||||
| C05B5.11.1 | ||||||||
| CE40685 | ||||||||
| Other_name | CELE_C05B5.11 | Accession_evidence | NDB | BX284603 | ||||
| Public_name | C05B5.11 | |||||||
| DB_info | Database | AceView | gene | 3L95 | ||||
| WormFlux | gene | WBGene00045242 | ||||||
| NDB | locus_tag | CELE_C05B5.11 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00045242|UniProtKB=A3FPK1 | ||||||
| family | PTHR36519 | |||||||
| NCBI | gene | 6418646 | ||||||
| RefSeq | protein | NM_001129203.4 | ||||||
| TREEFAM | TREEFAM_ID | TF322159 | ||||||
| TrEMBL | UniProtAcc | A3FPK1 | ||||||
| UniProt_GCRP | UniProtAcc | A3FPK1 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 29 Jan 2007 16:26:27 | WBPerson1983 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (11) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (18) | ||||||||
| Paralog (12) | ||||||||
| Structured_description | Automated_description | Enriched in MSpaapaa and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-12; rrf-3; and eat-2 based on RNA-seq and microarray studies. Is affected by ten chemicals including tryptophan; sodium arsenite; and Alovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: EB module and EB domain. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | C05B5.11 | ||||||
| Corresponding_transcript | C05B5.11.1 | |||||||
| Associated_feature | WBsf225654 | |||||||
| Experimental_info | RNAi_result | WBRNAi00000680 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1010257 | |||||||
| Expr1143781 | ||||||||
| Expr2000433 | ||||||||
| Expr2018656 | ||||||||
| Drives_construct | WBCnstr00023292 | |||||||
| Construct_product | WBCnstr00023292 | |||||||
| Microarray_results | 189071_at | |||||||
| Aff_C05B5.5 | ||||||||
| GPL14144_C05B5.11_195-254_0.957_1_A | ||||||||
| GPL14144_C05B5.11_89-148_0.947_2_B | ||||||||
| GPL19516_CGZ0002481 | ||||||||
| GPL21109_C05B5.11.1 | ||||||||
| GPL3518_CE00051 | ||||||||
| GPL9450_C05B5.5 | ||||||||
| cea2.p.55982 | ||||||||
| Expression_cluster (70) | ||||||||
| Map_info | Positive | Positive_clone | C05B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | III | 1.49709 | ||||||
| Reference | WBPaper00060772 | |||||||
| Method | Gene |
