WormBase Tree Display for Gene: WBGene00044898
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WBGene00044898 | SMap | S_parent | Sequence | T21G5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | let-383 | Person_evidence | WBPerson533 | |||
Sequence_name | T21G5.6 | ||||||
Molecular_name | T21G5.6 | ||||||
T21G5.6.1 | |||||||
CE40311 | |||||||
T21G5.6.2 | |||||||
T21G5.6.3 | |||||||
T21G5.6.4 | |||||||
T21G5.6.5 | |||||||
Other_name | CELE_T21G5.6 | Accession_evidence | NDB | BX284601 | |||
Public_name | let-383 | ||||||
DB_info | Database (7) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | let | ||||||
Reference_allele | WBVar00146437 | ||||||
Allele (80) | |||||||
Legacy_information | [C.elegansII] h115 : early to mid-larval lethal. OA3: h389, h527, h727. [Howell et al. 1987; [McKim et al. 1992; KR] | ||||||
Strain | WBStrain00023686 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (16) | |||||||
Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; intestine; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T21G5.6 | |||||
Corresponding_transcript | T21G5.6.1 | ||||||
T21G5.6.2 | |||||||
T21G5.6.3 | |||||||
T21G5.6.4 | |||||||
T21G5.6.5 | |||||||
Other_sequence | CJC00286_1 | ||||||
Dviv_isotig32627 | |||||||
Acan_isotig15906 | |||||||
Associated_feature | WBsf643409 | ||||||
WBsf656455 | |||||||
WBsf656456 | |||||||
WBsf656457 | |||||||
WBsf984015 | |||||||
WBsf984016 | |||||||
WBsf1009997 | |||||||
WBsf217917 | |||||||
Experimental_info | RNAi_result | WBRNAi00004248 | Inferred_automatically | RNAi_primary | |||
WBRNAi00082644 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082560 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035770 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025234 | ||||||
Expr1040336 | |||||||
Expr1157310 | |||||||
Drives_construct | WBCnstr00023338 | ||||||
Construct_product | WBCnstr00023338 | ||||||
Microarray_results (26) | |||||||
Expression_cluster (130) | |||||||
Map_info | Well_ordered | ||||||
Positive | Positive_clone | T21G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | 2_point | 2547 | |||||
Multi_point | 1033 | ||||||
2141 | |||||||
Pos_neg_data | 2703 | ||||||
5074 | |||||||
5353 | |||||||
6168 | |||||||
6542 | |||||||
4173 | |||||||
Interpolated_map_position | I | 1.42612 | |||||
Reference | WBPaper00000975 | ||||||
WBPaper00001557 | |||||||
WBPaper00002829 | |||||||
WBPaper00003985 | |||||||
WBPaper00040589 | |||||||
Method | Gene |