WormBase Tree Display for Gene: WBGene00044898
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WBGene00044898 | SMap | S_parent | Sequence | T21G5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | let | |||||
Reference_allele | WBVar00146437 | |||||
Allele (80) | ||||||
Legacy_information | [C.elegansII] h115 : early to mid-larval lethal. OA3: h389, h527, h727. [Howell et al. 1987; [McKim et al. 1992; KR] | |||||
Strain | WBStrain00023686 | |||||
RNASeq_FPKM (74) | ||||||
Ortholog (16) | ||||||
Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; intestine; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T21G5.6 | ||||
Corresponding_transcript | T21G5.6.1 | |||||
T21G5.6.2 | ||||||
T21G5.6.3 | ||||||
T21G5.6.4 | ||||||
T21G5.6.5 | ||||||
Other_sequence | CJC00286_1 | |||||
Dviv_isotig32627 | ||||||
Acan_isotig15906 | ||||||
Associated_feature (8) | ||||||
Experimental_info | RNAi_result | WBRNAi00004248 | Inferred_automatically | RNAi_primary | ||
WBRNAi00082644 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082560 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00035770 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1025234 | |||||
Expr1040336 | ||||||
Expr1157310 | ||||||
Drives_construct | WBCnstr00023338 | |||||
Construct_product | WBCnstr00023338 | |||||
Microarray_results (26) | ||||||
Expression_cluster (130) | ||||||
Map_info | Well_ordered | |||||
Positive | Positive_clone | T21G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Mapping_data | 2_point | 2547 | ||||
Multi_point | 1033 | |||||
2141 | ||||||
Pos_neg_data | 2703 | |||||
5074 | ||||||
5353 | ||||||
6168 | ||||||
6542 | ||||||
4173 | ||||||
Interpolated_map_position | I | 1.42612 | ||||
Reference | WBPaper00000975 | |||||
WBPaper00001557 | ||||||
WBPaper00002829 | ||||||
WBPaper00003985 | ||||||
WBPaper00040589 | ||||||
Method | Gene |