WormBase Tree Display for Gene: WBGene00044798
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| WBGene00044798 | SMap | S_parent | Sequence | Y46E12A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tbx-43 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y46E12A.4 | ||||||||
| Molecular_name | Y46E12A.4 | ||||||||
| Y46E12A.4.1 | |||||||||
| CE40215 | |||||||||
| Other_name | CELE_Y46E12A.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tbx-43 | ||||||||
| DB_info | Database | AceView | gene | Y46E12A.4 | |||||
| WormFlux | gene | WBGene00044798 | |||||||
| NDB | locus_tag | CELE_Y46E12A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044798|UniProtKB=Q1T6W8 | |||||||
| family | PTHR11267 | ||||||||
| NCBI | gene | 4363053 | |||||||
| RefSeq | protein | NM_001047418.4 | |||||||
| TrEMBL | UniProtAcc | Q1T6W8 | |||||||
| UniProt_GCRP | UniProtAcc | Q1T6W8 | |||||||
| OMIM | gene | 604895 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2006 13:49:25 | WBPerson1867 | Event | Created | |||
| 2 | 30 Mar 2009 16:48:11 | WBPerson9133 | Name_change | CGC_name | tbx-43 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tbx | ||||||||
| Allele (198) | |||||||||
| Strain | WBStrain00050762 | ||||||||
| WBStrain00052103 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (41) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell fate specification and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in asthma, nasal polyps, and aspirin intolerance; malaria; and primary immunodeficiency disease. Is an ortholog of human TBX21 (T-box transcription factor 21). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11599) | ||||
| DOID:12365 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11599) | ||||||
| DOID:0111579 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11599) | ||||||
| Molecular_info | Corresponding_CDS | Y46E12A.4 | |||||||
| Corresponding_transcript | Y46E12A.4.1 | ||||||||
| Other_sequence | CR07115 | ||||||||
| CRC00503_1 | |||||||||
| Associated_feature | WBsf666570 | ||||||||
| WBsf991380 | |||||||||
| WBsf991381 | |||||||||
| WBsf1014301 | |||||||||
| Experimental_info | Expr_pattern | Expr1012093 | |||||||
| Expr1040331 | |||||||||
| Expr1160132 | |||||||||
| Expr2017357 | |||||||||
| Expr2035494 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (124) | |||||||||
| Map_info | Map | III | Position | -17.0572 | Error | 0.468176 | |||
| Positive | Positive_clone | Y46E12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00041190 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065215 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
