WormBase Tree Display for Gene: WBGene00044787
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WBGene00044787 | SMap | S_parent | Sequence | C54D10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0000336 | ||||
Gene_class | pals | |||||
Allele (46) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOP5557 | |||||
CEOP550 | ||||||
Ortholog | WBGene00041840 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||
WBGene00142109 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||
WBGene00161337 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||
WBGene00061021 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||
WBGene00072363 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||
WBGene00084188 | Caenorhabditis remanei | From_analysis | TreeFam | |||
Paralog | WBGene00008301 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||
WBGene00008302 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00012091 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
WBGene00013294 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS_history | C54D10.12:wp195 | ||||
C54D10.12:wp256 | ||||||
Corresponding_pseudogene | C54D10.12 | |||||
Experimental_info | Expr_pattern | Expr1016902 | ||||
Expr1147104 | ||||||
Microarray_results (11) | ||||||
Expression_cluster (94) | ||||||
Map_info | Positive | Positive_clone | C54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | V | 4.21735 | ||||
Method | Gene |