WormBase Tree Display for Gene: WBGene00044654
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| WBGene00044654 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-85 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y61B8A.4 | ||||||||
| Molecular_name | Y61B8A.4 | ||||||||
| Y61B8A.4.1 | |||||||||
| CE39299 | |||||||||
| Other_name | CELE_Y61B8A.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-85 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00044654 | |||||
| NDB | locus_tag | CELE_Y61B8A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044654|UniProtKB=G5EEL4 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 4363110 | |||||||
| RefSeq | protein | NM_001047735.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | G5EEL4 | |||||||
| UniProt_GCRP | UniProtAcc | G5EEL4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 24 Oct 2005 17:29:45 | WBPerson1983 | Event | Created | |||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-85 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (135) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (223) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on RNA-seq; tiling array; and microarray studies. Is affected by five chemicals including Tunicamycin; stavudine; and silicon dioxide nanoparticle based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y61B8A.4 | |||||||
| Corresponding_transcript | Y61B8A.4.1 | ||||||||
| Associated_feature | WBsf718464 | ||||||||
| WBsf233138 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050554 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016988 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028772 | ||||||||
| Expr1161272 | |||||||||
| Expr2011583 | |||||||||
| Expr2029823 | |||||||||
| Drives_construct | WBCnstr00023421 | ||||||||
| Construct_product | WBCnstr00023421 | ||||||||
| Microarray_results | SMD_K10G4.2 | ||||||||
| A_12_P137460 | |||||||||
| GPL14144_Y61B8A.4_570-629_0.919_2_A | |||||||||
| GPL19516_CGZ0051487 | |||||||||
| GPL21109_Y61B8A.4 | |||||||||
| GPL8304_CE_WBGene00044654_A | |||||||||
| GPL8304_CE_WBGene00044654_B | |||||||||
| GPL8673_Y61B8A_4P00186 | |||||||||
| GPL8673_Y61B8A_4P00202 | |||||||||
| GPL8673_Y61B8A_4P00208 | |||||||||
| Expression_cluster (83) | |||||||||
| Map_info | Map | V | Position | 12.8467 | Error | 0.000492 | |||
| Positive | Positive_clone | Y61B8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00061168 | ||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
