WormBase Tree Display for Gene: WBGene00044578
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WBGene00044578 | SMap | S_parent | Sequence | K01A12 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | K01A12.4 | ||||||
Molecular_name | K01A12.4 | |||||||
K01A12.4.1 | ||||||||
CE31202 | ||||||||
Other_name | CELE_K01A12.4 | Accession_evidence | NDB | BX284606 | ||||
Public_name | K01A12.4 | |||||||
DB_info | Database | AceView | gene | XJ229 | ||||
WormFlux | gene | WBGene00044578 | ||||||
NDB | locus_tag | CELE_K01A12.4 | ||||||
NCBI | gene | 3896886 | ||||||
RefSeq | protein | NM_001038465.5 | ||||||
TREEFAM | TREEFAM_ID | TF322066 | ||||||
TrEMBL | UniProtAcc | G5ED56 | ||||||
UniProt_GCRP | UniProtAcc | G5ED56 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 20 Jun 2005 08:50:33 | WBPerson1867 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
Allele (11) | ||||||||
RNASeq_FPKM (74) | ||||||||
Ortholog | WBGene00148081 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00083720 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
Sp34_50031100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||||
chrX_pilon.g19614 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00017149 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | ||||||||
WormBase-Compara | ||||||||
WBGene00018565 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00019103 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | ||||||||
WBGene00019265 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00019732 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | ||||||||
Structured_description | Automated_description | Enriched in amphid neurons; head neurons; and rectal epithelium based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_CDS | K01A12.4 | ||||||
Corresponding_transcript | K01A12.4.1 | |||||||
Associated_feature | WBsf717350 | |||||||
Experimental_info | Expr_pattern | Expr1014682 | ||||||
Expr1153310 | ||||||||
Expr2004631 | ||||||||
Expr2022858 | ||||||||
Drives_construct | WBCnstr00023454 | |||||||
Construct_product | WBCnstr00023454 | |||||||
Microarray_results (12) | ||||||||
Expression_cluster (75) | ||||||||
Map_info | Positive | Positive_clone | K01A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Interpolated_map_position | X | 0.162133 | ||||||
Reference | WBPaper00046211 | |||||||
Method | Gene |