WormBase Tree Display for Gene: WBGene00044513
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| WBGene00044513 | SMap | S_parent | Sequence | Y58G8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nlp-70 | Paper_evidence | WBPaper00049796 | |||||
| Sequence_name | Y58G8A.5 | ||||||||
| Molecular_name | Y58G8A.5 | ||||||||
| Y58G8A.5.1 | |||||||||
| CE38907 | |||||||||
| Other_name | CELE_Y58G8A.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nlp-70 | ||||||||
| DB_info | Database | AceView | gene | Y58G8A.5 | |||||
| WormFlux | gene | WBGene00044513 | |||||||
| NDB | locus_tag | CELE_Y58G8A.5 | |||||||
| NCBI | gene | 3896862 | |||||||
| RefSeq | protein | NM_001392464.1 | |||||||
| TrEMBL | UniProtAcc | Q4R173 | |||||||
| UniProt_GCRP | UniProtAcc | Q4R173 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 14 Jun 2005 09:36:29 | WBPerson1867 | Event | Created | |||
| 2 | 13 Nov 2017 15:54:28 | WBPerson1983 | Name_change | CGC_name | nlp-70 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (25) | |||||||||
| Strain | WBStrain00055113 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in neurons and rectal epithelial cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including rotenone; multi-walled carbon nanotube; and D-glucose based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y58G8A.5 | |||||||
| Corresponding_transcript | Y58G8A.5.1 | ||||||||
| Associated_feature | WBsf999113 | ||||||||
| WBsf233253 | |||||||||
| WBsf233254 | |||||||||
| Experimental_info | Expr_pattern | Expr1029047 | |||||||
| Expr1161160 | |||||||||
| Expr2008091 | |||||||||
| Expr2026329 | |||||||||
| Drives_construct | WBCnstr00023509 | ||||||||
| Construct_product | WBCnstr00023509 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (65) | |||||||||
| Map_info | Map | V | Position | -20.005 | |||||
| Positive | Positive_clone | Y58G8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065366 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
