WormBase Tree Display for Gene: WBGene00044403
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| WBGene00044403 | SMap | S_parent | Sequence | Y54F10BM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-219 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y54F10BM.15 | ||||||||
| Molecular_name | Y54F10BM.15 | ||||||||
| Y54F10BM.15.1 | |||||||||
| CE38752 | |||||||||
| Other_name | CELE_Y54F10BM.15 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-219 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00044403 | |||||
| NDB | locus_tag | CELE_Y54F10BM.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044403|UniProtKB=Q4W5Q7 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 3565143 | |||||||
| RefSeq | protein | NM_001027739.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q4W5Q7 | |||||||
| UniProt_GCRP | UniProtAcc | Q4W5Q7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 27 May 2005 09:55:33 | WBPerson1867 | Event | Created | |||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-219 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (121) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including skn-1; rrf-3; and eat-2 based on RNA-seq and microarray studies. Is affected by four chemicals including bisphenol A; Zidovudine; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54F10BM.15 | |||||||
| Corresponding_transcript | Y54F10BM.15.1 | ||||||||
| Other_sequence | JI470597.1 | ||||||||
| JI476292.1 | |||||||||
| MH05971 | |||||||||
| Associated_feature | WBsf644975 | ||||||||
| Experimental_info | Expr_pattern | Expr1015769 | |||||||
| Expr1160846 | |||||||||
| Expr2011526 | |||||||||
| Expr2029763 | |||||||||
| Microarray_results | A_12_P154615 | ||||||||
| GPL14144_Y54F10BM.15_778-837_0.944_1_A | |||||||||
| GPL19516_CGZ0049116 | |||||||||
| GPL21109_Y54F10BM.15 | |||||||||
| GPL8304_CE_WBGene00044403_A | |||||||||
| GPL8304_CE_WBGene00044403_B | |||||||||
| GPL8673_Y54F10BM_15P00002 | |||||||||
| GPL8673_Y54F10BM_15P00009 | |||||||||
| GPL8673_Y54F10BM_15P00396 | |||||||||
| Expression_cluster (95) | |||||||||
| Map_info | Map | III | Position | -14.8176 | Error | 0.002319 | |||
| Positive | Positive_clone | Y54F10BM | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
