WormBase Tree Display for Gene: WBGene00044144
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WBGene00044144 | SMap | S_parent | Sequence | M153 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | znf-474 | Person_evidence | WBPerson10010 | |||||
WBPerson10503 | |||||||||
Sequence_name | M153.4 | ||||||||
Molecular_name | M153.4 | ||||||||
M153.4.1 | |||||||||
CE52828 | |||||||||
Other_name | CELE_M153.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | znf-474 | ||||||||
DB_info | Database | AceView | gene | M153.4 | |||||
WormFlux | gene | WBGene00044144 | |||||||
NDB | locus_tag | CELE_M153.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00044144|UniProtKB=Q565C3 | |||||||
family | PTHR13555 | ||||||||
NCBI | gene | 3565375 | |||||||
RefSeq | protein | NM_001368530.5 | |||||||
TREEFAM | TREEFAM_ID | TF328720 | |||||||
TrEMBL | UniProtAcc | Q565C3 | |||||||
UniProt_GCRP | UniProtAcc | Q565C3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Mar 2005 14:33:10 | WBPerson1846 | Event | Created | |||
2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | znf-474 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | znf | ||||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (27) | |||||||||
Paralog | WBGene00007253 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00020196 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in neurons; rectal epithelial cell; and rectum based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and pgl-1 based on RNA-seq and microarray studies. Is affected by seven chemicals including stavudine; Zidovudine; and Cry5B based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: zinc-finger of a C2HC-type and Zinc finger C2HC domain-containing protein. Is an ortholog of human ZNF474 (zinc finger protein 474). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | M153.4 | |||||||
Corresponding_CDS_history | M153.4:wp268 | ||||||||
Corresponding_transcript | M153.4.1 | ||||||||
Other_sequence | Acan_isotig07333 | ||||||||
Associated_feature | WBsf648591 | ||||||||
WBsf648592 | |||||||||
WBsf663399 | |||||||||
WBsf1007225 | |||||||||
WBsf236457 | |||||||||
WBsf236458 | |||||||||
Experimental_info | Expr_pattern | Expr1023784 | |||||||
Expr1154680 | |||||||||
Expr2005248 | |||||||||
Expr2023466 | |||||||||
Drives_construct | WBCnstr00023734 | ||||||||
Construct_product | WBCnstr00023734 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (127) | |||||||||
Map_info | Map | X | Position | 7.00724 | |||||
Positive | Positive_clone | M153 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |