WormBase Tree Display for Gene: WBGene00044112
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| WBGene00044112 | SMap | S_parent | Sequence | F47B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srm-5 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F47B8.12 | ||||||||
| Molecular_name | F47B8.12 | ||||||||
| F47B8.12.1 | |||||||||
| CE38189 | |||||||||
| Other_name | CELE_F47B8.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srm-5 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00044112 | |||||
| NDB | locus_tag | CELE_F47B8.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044112|UniProtKB=Q58A99 | |||||||
| family | PTHR47758 | ||||||||
| NCBI | gene | 3565108 | |||||||
| RefSeq | protein | NM_001028771.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318966 | |||||||
| TrEMBL | UniProtAcc | Q58A99 | |||||||
| UniProt_GCRP | UniProtAcc | Q58A99 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 18 Feb 2005 16:51:38 | WBPerson1846 | Event | Created | |||
| 2 | 21 Feb 2005 14:09:59 | WBPerson2970 | Name_change | CGC_name | srm-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srm | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081182 | ||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00005638 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00005639 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00009808 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00009810 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010273 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in ASHL; ASHR; ASIL; ASIR; and RIH. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47B8.12 | |||||||
| Corresponding_transcript | F47B8.12.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047626 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr14121 | ||||||||
| Expr1023763 | |||||||||
| Expr1151456 | |||||||||
| Drives_construct | WBCnstr00023757 | ||||||||
| Construct_product | WBCnstr00023757 | ||||||||
| Microarray_results | GPL13394_WBGene00044112 | ||||||||
| GPL13914_F47B8.12 | |||||||||
| GPL14144_F47B8.12_1033-1092_0.933_2_A | |||||||||
| GPL19516_CGZ0022336 | |||||||||
| GPL21109_F47B8.12 | |||||||||
| GPL8304_CE_WBGene00044112_A | |||||||||
| GPL8673_F47B8_12P00050 | |||||||||
| GPL8673_F47B8_12P00388 | |||||||||
| GPL8673_F47B8_12P00529 | |||||||||
| Expression_cluster (31) | |||||||||
| Map_info | Map | V | Position | 6.23454 | Error | 0.000997 | |||
| Positive | Positive_clone | F47B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
