WormBase Tree Display for Gene: WBGene00043666
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| WBGene00043666 | SMap | S_parent | Sequence | Y45G5AM | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||
| Name | Sequence_name | Y45G5AM.4 | ||||||
| Molecular_name | Y45G5AM.4 | |||||||
| Y45G5AM.4.1 | ||||||||
| CE38890 | ||||||||
| Other_name | CELE_Y45G5AM.4 | Accession_evidence | NDB | BX284605 | ||||
| Public_name | Y45G5AM.4 | |||||||
| DB_info | Database | AceView | gene | 5E641 | ||||
| WormFlux | gene | WBGene00043666 | ||||||
| NDB | locus_tag | CELE_Y45G5AM.4 | ||||||
| NCBI | gene | 3896859 | ||||||
| RefSeq | protein | NM_001038425.1 | ||||||
| TREEFAM | TREEFAM_ID | TF344026 | ||||||
| TrEMBL | UniProtAcc | Q4R151 | ||||||
| UniProt_GCRP | UniProtAcc | Q4R151 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 04 Oct 2004 10:58:10 | WBPerson1971 | Event | Created | ||
| Killed | ||||||||
| 2 | 15 Jun 2005 14:11:20 | WBPerson1867 | Event | Resurrected | ||||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (38) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (14) | ||||||||
| Paralog | WBGene00021557 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
| Inparanoid_8 | ||||||||
| WormBase-Compara | ||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplaapapa; ABpraapapa; PLM; carbon dioxide sensory neurons; and pharyngeal-intestinal valve cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and dpy-21 based on tiling array; microarray; and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | Y45G5AM.4 | ||||||
| Corresponding_CDS_history | Y45G5AM.4:wp88 | |||||||
| Corresponding_transcript | Y45G5AM.4.1 | |||||||
| Associated_feature | WBsf999743 | |||||||
| WBsf1019464 | ||||||||
| Experimental_info | Expr_pattern | Expr1016748 | ||||||
| Expr1160106 | ||||||||
| Expr2007565 | ||||||||
| Expr2025801 | ||||||||
| Microarray_results (11) | ||||||||
| Expression_cluster (43) | ||||||||
| Map_info | Positive | Positive_clone | Y45G5AM | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | V | -6.35466 | ||||||
| Remark | The corresponding CDS object for this gene had been created and removed before WormBase introduced the concept of unique gene identifiers. This (dead) gene object exists as an attempt to make sure that a gene ID exists for every worm gene prediction that has ever existed. | Curator_confirmed | WBPerson1971 | |||||
| This gene has been resurrected based on C.briggsae homology and twinscan data. | Curator_confirmed | WBPerson1867 | ||||||
| [050610 pad] Automatic assignment of Sequence_name connection using info taken from Public_name tags. | ||||||||
| Method | Gene |
