WormBase Tree Display for Gene: WBGene00042749

WBGene00042749 SMap: S_parent: Sequence: cb25.NA_206
  Identity: Version: 2
    Name: CGC_name: Cbr-lpd-8 From_analysis: Inferred_from_orthology
      Sequence_name: CBG24700
      Molecular_name: CBG24700
        CBG24700.1
        CBP12999
      Other_name: CBG_24700 Accession_evidence: NDB HE601238
        Cbr-lpd-8 From_analysis: Inferred_from_orthology
      Public_name: Cbr-lpd-8
    DB_info: Database: NDB locus_tag CBG_24700
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-lpd-8
        3 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-nfu-1
                Other_name: Cbr-lpd-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lpd
    RNASeq_FPKM: WBls:0000002 46.0104 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        46.3674 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        49.5774 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        56.3545 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        51.361 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        55.9847 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        75.2066 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 57.9106 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        58.9938 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        60.077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        55.7864 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        57.9247 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 28.2862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        33.293 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        38.2998 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        26.3938 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        28.61 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        31.5795 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        36.3076 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 11.0244 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        15.236 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.3324 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        32.3512 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        20.3804 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        21.6878 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        35.8137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 31.7463 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 22.083 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        36.2781 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        41.2141 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        44.6831 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        53.0881 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        53.4074 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 102.601 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        103.543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        104.291 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        105.039 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        108.94 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        92.8817 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        106.99 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        109.201 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        110.06 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        134.74 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 31.4277 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        32.8102 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        35.7215 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        37.5964 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        39.3002 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        48.7224 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        37.5108 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        40.4733 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        54.8576 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 39.3002 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        45.6863 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        41.3248 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        49.5441 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00145747
      00145748
      00145749
    Ortholog (31)
    Structured_description: Automated_description: Predicted to enable iron ion binding activity and iron-sulfur cluster binding activity. Predicted to be involved in iron-sulfur cluster assembly. Is an ortholog of C. elegans nfu-1. In C. elegans, nfu-1 is involved in lipid storage. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG24700
    Corresponding_CDS_history: CBG24700:bp194
    Corresponding_transcript: CBG24700.1
    Other_sequence (36)
  Experimental_info: Expr_pattern: Expr1050023
    Microarray_results: GPL8303_CB6_WBGene00042749_A
      GPL8303_CB6_WBGene00042749_B
      GPL8303_CB6_WBGene00042749_C
      GPL14143_CBG24700_403-462_0.717_72_B
      GPL14143_CBG24700_527-586_0.851_21_C
      GPL14143_CBG24700_587-646_0.947_1_A
  Method: Gene