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WormBase Tree Display for Gene: WBGene00042675

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Name Class

WBGene00042675SMapS_parentSequencecb25.NA_195
IdentityVersion2
NameCGC_nameCbr-ttr-15From_analysisInferred_from_orthology
Sequence_nameCBG24605
Molecular_nameCBG24605
CBG24605.1
CBP12969
Other_nameCBG_24605Accession_evidenceNDBHE601354
Public_nameCbr-ttr-15
DB_infoDatabaseNDBlocus_tagCBG_24605
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-ttr-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
RNASeq_FPKMWBls:0000002250.82From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
251.816From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
367.318From_analysisRNASeq.briggsae.WBls:0000002.control_mean
599.317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
260.486From_analysisRNASeq.briggsae.WBls:0000002.control_median
269.156From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
342.777From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.766From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
6.165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
8.4655From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
12.4435From_analysisRNASeq.briggsae.WBls:0000003.control_mean
20.3995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000411.9914From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
6.79021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.39081From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
11.5474From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.9779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
13.3359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
13.6417From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027115.853From_analysisRNASeq.briggsae.WBls:0000027.control_mean
127.731From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
173.797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
46.0296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1167.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
150.764From_analysisRNASeq.briggsae.WBls:0000027.control_median
378.724From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035287.022From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381087.59From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1122.19From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1269.94From_analysisRNASeq.briggsae.WBls:0000038.control_median
1417.7From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1462.51From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
347.956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000411198.64From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
176.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
204.025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
206.111From_analysisRNASeq.briggsae.WBls:0000041.control_median
208.196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
446.8From_analysisRNASeq.briggsae.WBls:0000041.control_mean
196.08From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
447.168From_analysisRNASeq.briggsae.WBls:0000041.control_mean
699.728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631014.86From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
490.124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
494.343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
524.003From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
603.455From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
625.357From_analysisRNASeq.briggsae.WBls:0000063.control_mean
330.954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
509.173From_analysisRNASeq.briggsae.WBls:0000063.control_median
576.29From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101347.956From_analysisRNASeq.briggsae.total_over_all_stages.control_median
505.033From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
278.089From_analysisRNASeq.briggsae.total_over_all_stages.control_median
457.068From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145696
Ortholog (26)
Paralog (49)
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface. Is an ortholog of C. elegans ttr-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24605
Corresponding_CDS_historyCBG24605:bp194
Corresponding_transcriptCBG24605.1
Other_sequence (69)
Experimental_infoExpr_patternExpr1051215
Microarray_resultsGPL8303_CB6_WBGene00042675_A
GPL14143_CBG24605_38-97_0.930_14_C
GPL14143_CBG24605_245-304_0.966_2_B
GPL14143_CBG24605_333-392_0.974_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene