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WormBase Tree Display for Gene: WBGene00042591

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Name Class

WBGene00042591SMapS_parentSequencecb25.NA_171
IdentityVersion1
NameSequence_nameCBG24495
Molecular_nameCBG24495
CBG24495.1
CBP35174
Other_nameCBG_24495Accession_evidenceNDBHE601095
Public_nameCBG24495
DB_infoDatabaseNDBlocus_tagCBG_24495
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002109.42From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
72.9631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
80.0177From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
87.4669From_analysisRNASeq.briggsae.WBls:0000002.control_mean
126.366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
94.7188From_analysisRNASeq.briggsae.WBls:0000002.control_median
97.1917From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003178.937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
182.303From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
185.669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
143.572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
169.393From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004134.941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
141.958From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
148.975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
126.327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
140.299From_analysisRNASeq.briggsae.WBls:0000004.control_mean
144.426From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
146.825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002715.4832From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
26.0161From_analysisRNASeq.briggsae.WBls:0000027.control_mean
56.6025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.96246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
32.7345From_analysisRNASeq.briggsae.WBls:0000027.control_mean
34.1866From_analysisRNASeq.briggsae.WBls:0000027.control_median
52.89From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003540.0731From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038113.583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
35.9218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
60.2912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
61.6518From_analysisRNASeq.briggsae.WBls:0000038.control_median
63.0124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
68.2021From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:0000041101.549From_analysisRNASeq.briggsae.WBls:0000041.control_median
106.989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
116.111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
62.4293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
95.4097From_analysisRNASeq.briggsae.WBls:0000041.control_mean
96.1094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
103.414From_analysisRNASeq.briggsae.WBls:0000041.control_mean
155.577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
83.2661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063114.596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
64.2489From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
69.116From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
70.9686From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
78.0097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
79.3878From_analysisRNASeq.briggsae.WBls:0000063.control_mean
73.5916From_analysisRNASeq.briggsae.WBls:0000063.control_median
76.2146From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
78.859From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010171.353From_analysisRNASeq.briggsae.total_over_all_stages.control_median
80.9719From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
79.0137From_analysisRNASeq.briggsae.total_over_all_stages.control_median
89.5697From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145615
Ortholog (29)
ParalogWBGene00040019Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be part of small-subunit processome. Is an ortholog of C. elegans F30A10.9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24495
Corresponding_CDS_historyCBG24495:bp194
Corresponding_transcriptCBG24495.1
Other_sequence (54)
Experimental_infoExpr_patternExpr1054344
Microarray_resultsGPL8303_CB6_WBGene00042591_A
GPL8303_CB6_WBGene00042591_B
GPL14143_CBG24495_150-209_0.845_30_A
GPL14143_CBG24495_214-273_0.937_4_C
GPL14143_CBG24495_392-451_0.967_1_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene