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WormBase Tree Display for Gene: WBGene00042434

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Name Class

WBGene00042434SMapS_parentSequencecb25.NA_132
IdentityVersion2
NameCGC_nameCbr-grl-15From_analysisInferred_from_orthology
Sequence_nameCBG24285
Molecular_nameCBG24285
CBG24285.1
CBP12825
Other_nameCBG_24285Accession_evidenceNDBHE601539
Public_nameCbr-grl-15
DB_infoDatabaseNDBlocus_tagCBG_24285
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-grl-15
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgrl
Allele (13)
RNASeq_FPKMWBls:000000233.4678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
35.246From_analysisRNASeq.briggsae.WBls:0000002.control_mean
36.0069From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
36.2634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
27.6815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
33.3549From_analysisRNASeq.briggsae.WBls:0000002.control_mean
34.7374From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.98343From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.96686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
5.56951From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.74168From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004138.538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
155.428From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
172.319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
139.486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
146.525From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
148.069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
148.987From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:0000027186.292From_analysisRNASeq.briggsae.WBls:0000027.control_mean
36.2908From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
513.448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.13651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
148.213From_analysisRNASeq.briggsae.WBls:0000027.control_mean
33.9783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
35.1345From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003533.5939From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038106.257From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.7229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
278.948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
52.3992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
67.6779From_analysisRNASeq.briggsae.WBls:0000038.control_median
82.9566From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.251118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.732683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.5262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.23724From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.7418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.31295From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.07864From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.70903From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.41548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
4.58688From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.0241From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.1706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
10.978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.1109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.6983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
9.79638From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.707769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.28161From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.8612From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010110.5262From_analysisRNASeq.briggsae.total_over_all_stages.control_median
57.2118From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.6245From_analysisRNASeq.briggsae.total_over_all_stages.control_median
57.1404From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
Paralog (24)
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 based on RNA-seq studies. Is predicted to encode a protein with the following domain: Ground-like domain. Is an ortholog of C. elegans grl-15.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24285
Corresponding_CDS_historyCBG24285:bp194
Corresponding_transcriptCBG24285.1
Other_sequenceFC814343.1
MCC00874_1
CR00401
BE217657.1
FC813140.1
MH06184
FD516055.1
CJC09735_1
CRC07593_1
CSC01541_1
Experimental_infoExpr_patternExpr1065075
Microarray_resultsGPL8303_CB6_WBGene00042434_A
GPL8303_CB6_WBGene00042434_B
GPL14143_CBG24285_264-323_0.927_1_B
GPL14143_CBG24285_355-414_0.760_13_C
GPL14143_CBG24285_451-510_0.927_2_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
ReferenceWBPaper00028754
WBPaper00031588
MethodGene