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WormBase Tree Display for Gene: WBGene00042285

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Name Class

WBGene00042285SMapS_parentSequencecb25.NA_097
IdentityVersion1
NameSequence_nameCBG24093
Molecular_nameCBG24093
CBG24093.1
CBP40858
Other_nameCBG_24093Accession_evidenceNDBHE601225
Public_nameCBG24093
DB_infoDatabaseNDBlocus_tagCBG_24093
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:12WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000022.32229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.64764From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.77195From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.84868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.44639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.34733From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.54712From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.128249From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.256499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.286483From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.602949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.94221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
0.965954From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.989697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.377151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.859917From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.919027From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.42616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.282425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.99727From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
1.2149From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.36499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.68113From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.18962From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.11381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.89393From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.536357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.01855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.6616From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.28616From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.30464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.28508From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.339063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.669666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.756536From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.843407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.08211From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.47632From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.65986From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.60893From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.10315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
7.22199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.164043From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.180766From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.200644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.539145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.182343From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.277056From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.758506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.989697From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.36817From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.993483From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.38387From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00017353Caenorhabditis elegansFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00054735Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CSP26.g21794Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g16143Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-F10E9.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold489.g2027Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00350.g9897Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_22025Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009811Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g8365Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00036517Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans F10E9.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG24093
Corresponding_CDS_historyCBG24093:bp194
CBG24093:bp255
Corresponding_transcriptCBG24093.1
MethodGene