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WormBase Tree Display for Gene: WBGene00041942

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Name Class

WBGene00041942SMapS_parentSequencecb25.NA_015
IdentityVersion2
NameCGC_nameCbr-acc-1From_analysisInferred_from_orthology
Sequence_nameCBG23634
Molecular_nameCBG23634
CBG23634.1
CBP24512
Other_nameCBG_23634Accession_evidenceNDBHE601498
Public_nameCbr-acc-1
DB_infoDatabaseNDBlocus_tagCBG_23634
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-acc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacc
Allele (18)
RNASeq_FPKMWBls:00000021.38988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.5443From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.76978From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.37515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.62347From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.70264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.75299From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.090395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.19065From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.290904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.242356From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.345768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.30086From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.79691From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.29296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.00999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.07477From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2.14315From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.03715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.261345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.887087From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.22518From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.52712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.26565From_analysisRNASeq.briggsae.WBls:0000027.control_median
2.57994From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.64422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.45505From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.20031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.27387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.77285From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.9679From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.27182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.12561From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.286135From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.348491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.383693From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.418896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.539718From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.10535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.676242From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.683085From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.947274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.951307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.242329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.320948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.756697From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.785722From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.924985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.5095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.78515From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.855353From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.927416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.30086From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.97943From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.34537From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.92221From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145191
00145192
00145193
00145194
00145195
00145196
Ortholog (26)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans acc-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23634
Corresponding_CDS_historyCBG23634:bp194
CBG23634:bp255
Corresponding_transcriptCBG23634.1
Other_sequence (45)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00041942_A
GPL8303_CB6_WBGene00041942_B
GPL14143_CBG23634_29-88_0.855_31_C
MethodGene