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WormBase Tree Display for Gene: WBGene00041813

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Name Class

WBGene00041813SMapS_parentSequencecb25.fpc4470
IdentityVersion2
NameCGC_nameCbr-tomm-20From_analysisInferred_from_orthology
Sequence_nameCBG23457
Molecular_nameCBG23457
CBG23457.1
CBP05557
Other_nameCBG_23457Accession_evidenceNDBHE601533
Public_nameCbr-tomm-20
DB_infoDatabaseNDBlocus_tagCBG_23457
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
223 Apr 2010 14:43:28WBPerson2970Name_changeCGC_nameCbr-tomm-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtomm
RNASeq_FPKMWBls:0000002166.84From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
168.313From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
175.47From_analysisRNASeq.briggsae.WBls:0000002.control_mean
191.256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
179.785From_analysisRNASeq.briggsae.WBls:0000002.control_median
192.315From_analysisRNASeq.briggsae.WBls:0000002.control_mean
242.852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003241.227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
242.417From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
243.608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
242.66From_analysisRNASeq.briggsae.WBls:0000003.control_mean
243.145From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004161.228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
166.606From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
171.984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
163.183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
178.725From_analysisRNASeq.briggsae.WBls:0000004.control_mean
189.707From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
207.524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027167.357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
19.5948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
60.2075From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
82.3864From_analysisRNASeq.briggsae.WBls:0000027.control_mean
101.691From_analysisRNASeq.briggsae.WBls:0000027.control_median
143.174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
97.5833From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035176.606From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038160.002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
170.272From_analysisRNASeq.briggsae.WBls:0000038.control_mean
177.038From_analysisRNASeq.briggsae.WBls:0000038.control_median
194.075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
243.525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
83.4849From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041200.324From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
212.686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
219.917From_analysisRNASeq.briggsae.WBls:0000041.control_mean
222.542From_analysisRNASeq.briggsae.WBls:0000041.control_median
232.398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
234.261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
228.368From_analysisRNASeq.briggsae.WBls:0000041.control_mean
232.164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
232.281From_analysisRNASeq.briggsae.WBls:0000041.control_median
258.377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063155.379From_analysisRNASeq.briggsae.WBls:0000063.control_mean
186.444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
189.469From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
190.306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
210.674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
156.462From_analysisRNASeq.briggsae.WBls:0000063.control_mean
161.876From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
187.956From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101165.697From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
180.635From_analysisRNASeq.briggsae.total_over_all_stages.control_median
174.927From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
185.744From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00145119
00145120
00145121
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be involved in protein targeting. Predicted to be part of mitochondrial outer membrane translocase complex. Is an ortholog of C. elegans tomm-20.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23457
Corresponding_CDS_historyCBG23457:bp194
Corresponding_transcriptCBG23457.1
Other_sequence (35)
Experimental_infoExpr_patternExpr1059256
Microarray_resultsGPL8303_CB6_WBGene00041813_A
GPL8303_CB6_WBGene00041813_B
GPL14143_CBG23457_73-132_0.928_7_C
GPL14143_CBG23457_348-407_0.943_4_A
GPL14143_CBG23457_499-558_0.950_2_B
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene