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WormBase Tree Display for Gene: WBGene00041801

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Name Class

WBGene00041801SMapS_parentSequencecb25.fpc4470
IdentityVersion1
NameSequence_nameCBG23441
Molecular_nameCBG23441
CBG23441.1
CBP07161
Other_nameCBG_23441Accession_evidenceNDBHE601533
Public_nameCBG23441
DB_infoDatabaseNDBlocus_tagCBG_23441
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000022.13746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.05595From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.23539From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.15918From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.35212From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.46886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.40923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.54265From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.67608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.6951From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000042.16144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.35616From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
4.55088From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.2439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.46145From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
4.28353From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000271.75612From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.93824From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.05859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.65981From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.90736From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.82452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.79516From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000383.19395From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.66968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
4.64156From_analysisRNASeq.briggsae.WBls:0000038.control_median
5.10513From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.61345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
7.94345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.163533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.391137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.709409From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.02768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.1736From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.11204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.77955From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.86678From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.53142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.97488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.180032From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.900161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.150027From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.13746From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.45547From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.34643From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.65036From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00145093
00145094
00145095
00145096
Ortholog (106)
ParalogWBGene00024732Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028216Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028219Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028247Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028398Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032089Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038550Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041797Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00088321Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-48; his-41; and his-34. In C. elegans, his-34 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23441
Corresponding_CDS_historyCBG23441:bp194
Corresponding_transcriptCBG23441.1
Other_sequence (29)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00041801_A
MethodGene