Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00041660

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00041660SMapS_parentSequencecb25.fpc4470
IdentityVersion2
NameCGC_nameCbr-smoc-1From_analysisInferred_from_orthology
Sequence_nameCBG23276
Molecular_nameCBG23276
CBG23276.1
CBP12384
Other_nameCBG_23276Accession_evidenceNDBHE601533
Public_nameCbr-smoc-1
DB_infoDatabaseNDBlocus_tagCBG_23276
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
208 Feb 2019 15:42:26WBPerson1983Name_changeCGC_nameCbr-smoc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsmoc
RNASeq_FPKMWBls:00000022.98154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.06455From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.16135From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.43795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.16793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.02305From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.16299From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.207874From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.623621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.199383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.574607From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.949831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.42491From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.43302From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.542318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.276301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.654632From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.60312From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.87842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.65459From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.73182From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.80901From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000356.94932From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.316792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.87661From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.71333From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.7542From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.63178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.02815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.210737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.368877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.392976From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.417076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.619995From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.48329From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.728808From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.946658From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.04054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.15943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.333492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.820139From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.896825From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.22435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.64603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.894808From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.06059From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.26815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.22435From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.26776From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.10424From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.86339From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00144882
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans smoc-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23276
Corresponding_CDS_historyCBG23276:bp194
Corresponding_transcriptCBG23276.1
Other_sequenceDviv_isotig18039
Acan_isotig12194
Oden_isotig25710
Dviv_isotig18040
Experimental_infoExpr_patternExpr1067153
Microarray_resultsGPL8303_CB6_WBGene00041660_A
GPL8303_CB6_WBGene00041660_B
GPL14143_CBG23276_254-313_0.873_18_A
GPL14143_CBG23276_627-686_0.938_4_C
GPL14143_CBG23276_727-786_0.954_1_B
MethodGene