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WormBase Tree Display for Gene: WBGene00041580

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Name Class

WBGene00041580SMapS_parentSequencecb25.fpc4470
IdentityVersion2
NameCGC_nameCbr-grl-7From_analysisInferred_from_orthology
Sequence_nameCBG23176
Molecular_nameCBG23176a
CBG23176a.1
CBP05493
CBG23176b
CBP45987
CBG23176b.1
Other_nameCBG_23176Accession_evidenceNDBHE601533
Public_nameCbr-grl-7
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-grl-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgrl
RNASeq_FPKMWBls:000000249.9715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
77.589From_analysisRNASeq.briggsae.WBls:0000002.control_mean
83.4029From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
99.3925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
62.7978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
73.1003From_analysisRNASeq.briggsae.WBls:0000002.control_median
73.8912From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.428139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
18.9271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.67762From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
11.9181From_analysisRNASeq.briggsae.WBls:0000003.control_mean
16.3991From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004158.491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
165.036From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
171.582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
168.863From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
175.241From_analysisRNASeq.briggsae.WBls:0000004.control_mean
178.435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
198.836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027172.48From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
276.119From_analysisRNASeq.briggsae.WBls:0000027.control_mean
584.689From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
71.188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
122.107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
147.294From_analysisRNASeq.briggsae.WBls:0000027.control_median
237.616From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:0000035106.698From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038126.514From_analysisRNASeq.briggsae.WBls:0000038.control_mean
136.989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
137.006From_analysisRNASeq.briggsae.WBls:0000038.control_median
137.023From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
193.872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
38.1736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.789082From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.20691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
14.6496From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.64489From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.08287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
52.5194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
12.8344From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
14.4434From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.2277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
8.45864From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.88577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.00415From_analysisRNASeq.briggsae.WBls:0000063.control_mean
7.48599From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.81982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.82918From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.72296From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.12395From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.68588From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010138.1736From_analysisRNASeq.briggsae.total_over_all_stages.control_median
77.9827From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
44.0726From_analysisRNASeq.briggsae.total_over_all_stages.control_median
79.94From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (29)
Paralog (24)
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 based on RNA-seq studies. Is predicted to encode a protein with the following domain: Ground-like domain. Is an ortholog of C. elegans grl-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23176a
CBG23176b
Corresponding_CDS_historyCBG23176:bp194
Corresponding_transcriptCBG23176a.1
CBG23176b.1
Other_sequenceCRC02593_1
CR11413
Dviv_isotig23089
PPC06936_1
OOC00271_1
CR01442
Experimental_infoExpr_patternExpr1063739
Microarray_resultsGPL8303_CB6_WBGene00041580_A
GPL8303_CB6_WBGene00041580_B
GPL14143_CBG23176_778-837_0.765_69_C
GPL14143_CBG23176_907-966_0.919_9_A
GPL14143_CBG23176_1023-1082_0.968_1_B
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
ReferenceWBPaper00028754
WBPaper00031588
MethodGene