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WormBase Tree Display for Gene: WBGene00041481

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Name Class

WBGene00041481SMapS_parentSequencecb25.fpc4470
IdentityVersion1
NameSequence_nameCBG23055
Molecular_nameCBG23055
CBG23055.1
CBP20640
Other_nameCBG_23055Accession_evidenceNDBHE601533
Public_nameCBG23055
DB_infoDatabaseNDBlocus_tagCBG_23055
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (14)
RNASeq_FPKMWBls:000000223.0694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.3862From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
27.7769From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
28.8194From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.1665From_analysisRNASeq.briggsae.WBls:0000002.control_median
31.9469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.511065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.851992From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.19292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.567995From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.04524From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.51845From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.99166From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.22038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.36204From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.42164From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.48888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000271.16042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
20.4008From_analysisRNASeq.briggsae.WBls:0000027.control_mean
4.63807From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
55.4038From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
198.133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
30.0209From_analysisRNASeq.briggsae.WBls:0000027.control_median
64.8338From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003550.9086From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038121.129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
34.1041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.43602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
35.6072From_analysisRNASeq.briggsae.WBls:0000038.control_median
37.1102From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
48.9448From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004128.2641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
43.4081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
49.6244From_analysisRNASeq.briggsae.WBls:0000041.control_mean
52.5368From_analysisRNASeq.briggsae.WBls:0000041.control_median
61.6655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
65.16From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
42.9256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
50.7078From_analysisRNASeq.briggsae.WBls:0000041.control_mean
62.8237From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006312.5181From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.3295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
14.3745From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
16.4662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.4204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
15.4204From_analysisRNASeq.briggsae.WBls:0000063.control_median
17.2197From_analysisRNASeq.briggsae.WBls:0000063.control_mean
40.7277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010123.0694From_analysisRNASeq.briggsae.total_over_all_stages.control_median
30.3839From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
24.7278From_analysisRNASeq.briggsae.total_over_all_stages.control_median
33.2043From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (20)
Paralog (21)
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans F17C11.11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG23055
Corresponding_CDS_historyCBG23055:bp194
Corresponding_transcriptCBG23055.1
Other_sequenceFD516509.1
CSC01312_1
BE225474.1
Experimental_infoExpr_patternExpr1057928
Microarray_resultsGPL8303_CB6_WBGene00041481_A
GPL14143_CBG23055_202-261_0.892_24_B
GPL14143_CBG23055_631-690_0.837_52_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00058955:heatshock_upregulated_CBG
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene