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WormBase Tree Display for Gene: WBGene00041294

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Name Class

WBGene00041294SMapS_parentSequencecb25.fpc4426a
IdentityVersion1
NameSequence_nameCBG22828
Molecular_nameCBG22828
CBG22828.1
CBP44683
Other_nameCBG_22828Accession_evidenceNDBHE600994
Public_nameCBG22828
DB_infoDatabaseNDBlocus_tagCBG_22828
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:11WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKMWBls:000000212.4838From_analysisRNASeq.briggsae.WBls:0000002.control_mean
15.9246From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.73071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
19.7961From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.2391From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11.7148From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.50494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.412786From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.825572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.275191From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.7262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.8174From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.9085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
14.4777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
15.788From_analysisRNASeq.briggsae.WBls:0000004.control_mean
18.1148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
18.7126From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.548292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
14.5315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.07027From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.05002From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.975853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.02306From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.78148From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000356.59349From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.9822From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.5274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
228.867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.32428From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
4.43695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
63.5389From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004115.1281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.34896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.04113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.62426From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.20738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7.68139From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.3939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
5.20351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.70544From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.2205From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006312.5062From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.9337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
14.1149From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
14.2352From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.508679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
10.5066From_analysisRNASeq.briggsae.WBls:0000063.control_mean
14.0243From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010111.7262From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.1352From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
10.5367From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.153From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (106)
ParalogWBGene00041295Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00024528Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032755Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034392Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034393Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034394Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034395Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034396Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034397Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041134Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF684) and Protein of unknown function DUF684. Is an ortholog of C. elegans F45D11.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22828
Corresponding_CDS_historyCBG22828:bp194
CBG22828:bp255
Corresponding_transcriptCBG22828.1
Other_sequenceCRC12555_1
JI480702.1
CR05397
JI469810.1
Experimental_infoExpr_patternExpr1054327
Microarray_resultsGPL8303_CB6_WBGene00041294_A
GPL8303_CB6_WBGene00041294_B
GPL14143_CBG22828_994-1053_0.954_1_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene