WormBase Tree Display for Gene: WBGene00041251

WBGene00041251 SMap: S_parent: Sequence: cb25.fpc4403
  Identity: Version: 2
    Name: CGC_name: Cbr-spp-13 From_analysis: Inferred_from_orthology
      Sequence_name: CBG22763
      Molecular_name: CBG22763
        CBG22763.1
        CBP20493
      Other_name: CBG_22763 Accession_evidence: NDB HE601156
      Public_name: Cbr-spp-13
    DB_info: Database: NDB locus_tag CBG_22763
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:11 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-spp-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spp
    RNASeq_FPKM: WBls:0000002 27.1306 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        40.1264 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        44.3573 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        48.8912 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        25.8628 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        35.7439 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        36.5605 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 1.28098 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        15.142 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        8.21149 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        11.2734 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        17.3971 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 76.1833 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        80.5686 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        84.9539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        102.145 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        200.519 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        71.3601 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        77.7067 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 0.500673 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        10.5754 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
        2.29507 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        3.08879 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        35.6234 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        3.88252 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        3.96418 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        6.9813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
      WBls:0000027 0.664906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        14.9269 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        37.9591 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        6.15658 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        12.4954 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        15.9037 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        18.8342 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 56.3412 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 120.072 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        19.7357 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        35.414 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        49.5887 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        51.0923 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        7.45486 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 1.7073 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        2.64744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        30.8136 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3.62533 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.60322 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        9.94289 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        11.342 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        11.5585 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        16.7218 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        8.08086 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 0.859093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        2.16089 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        2.30465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        2.3308 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        6.32936 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        1.50999 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        1.94233 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 23.8325 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        6.32936 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        15.9319 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        29.7659 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (22)
    Structured_description: Automated_description: Is affected by Cbr-htz-1 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Saposin B type, region 2; Saposin B type domain; Saposin-like type B, region 2; and Saposin-like. Is an ortholog of C. elegans spp-13. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG22763
    Corresponding_CDS_history: CBG22763:bp194
    Corresponding_transcript: CBG22763.1
    Other_sequence: CJC00034_1
  Experimental_info: Expr_pattern: Expr1051417
    Microarray_results: GPL8303_CB6_WBGene00041251_A
      GPL8303_CB6_WBGene00041251_B
      GPL14143_CBG22763_173-232_0.879_2_B
      GPL14143_CBG22763_219-278_0.905_1_A
      GPL14143_CBG22763_317-376_0.772_17_C
    Expression_cluster: WBPaper00059178:Cbr-htz-1(gu167)_downregulated
  Method: Gene