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WormBase Tree Display for Gene: WBGene00040965

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Name Class

WBGene00040965SMapS_parentSequencecb25.fpc4334a
IdentityVersion2
NameCGC_nameCbr-rpl-29From_analysisInferred_from_orthology
Sequence_nameCBG22400
Molecular_nameCBG22400
CBG22400.1
CBP05354
Other_nameCBG_22400Accession_evidenceNDBHE600912
Public_nameCbr-rpl-29
DB_infoDatabaseNDBlocus_tagCBG_22400
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-rpl-29
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
RNASeq_FPKMWBls:000000211061.7From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11684.9From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5747.64From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
9498.08From_analysisRNASeq.briggsae.WBls:0000002.control_mean
11373.3From_analysisRNASeq.briggsae.WBls:0000002.control_median
14487.7From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29456.6From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031034.91From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1306.49From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
763.323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
806.277From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
958.697From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000041693.5From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1790.07From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1886.65From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1904.93From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
2787.5From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4719.41From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000275335.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
6151.8From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6170.52From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6949.2From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6539.7From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6559.86From_analysisRNASeq.briggsae.WBls:0000027.control_median
7703.42From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358626.63From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814705.9From_analysisRNASeq.briggsae.WBls:0000038.control_mean
31529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8620.4From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9317.48From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9337.19From_analysisRNASeq.briggsae.WBls:0000038.control_median
9356.9From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000415883.38From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
6336.59From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
6492.24From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6494.96From_analysisRNASeq.briggsae.WBls:0000041.control_median
6653.34From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
7095.65From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5618.91From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
6530.95From_analysisRNASeq.briggsae.WBls:0000041.control_mean
7597.82From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006320050.2From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2862.8From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
3049.17From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3108.68From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
6856.94From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7185.56From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4204.52From_analysisRNASeq.briggsae.WBls:0000063.control_median
5300.36From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
6871.36From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001016653.34From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7884.37From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
6382.09From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7775.99From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00144297
00144298
00144299
Ortholog (14)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rpl-29.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22400
Corresponding_CDS_historyCBG22400:bp194
CBG22400:bp255
Corresponding_transcriptCBG22400.1
Other_sequence (395)
Experimental_infoExpr_patternExpr1065615
Microarray_resultsGPL8303_CB6_WBGene00040965_A
GPL8303_CB6_WBGene00040965_B
GPL14143_CBG22400_2-61_0.955_2_B
GPL14143_CBG22400_29-88_0.941_3_C
GPL14143_CBG22400_34-93_0.962_1_A
MethodGene