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WormBase Tree Display for Gene: WBGene00040825

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Name Class

WBGene00040825SMapS_parentSequencecb25.fpc4321
IdentityVersion3
NameSequence_nameCBG22217
Molecular_nameCBG22217
CBG22217.1
CBP25990
Other_nameCBG_22217Accession_evidenceNDBHE601428
Cbr-tag-96
Public_nameCBG22217
DB_infoDatabaseNDBlocus_tagCBG_22217
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-tag-96
303 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000210.2184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
8.33319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
9.30698From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.36934From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
5.448From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.34223From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.85126From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000311.8669From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
13.8022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
9.93163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
12.0126From_analysisRNASeq.briggsae.WBls:0000003.control_mean
12.3041From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000422.6545From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
23.0192From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
23.3839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
20.7389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
21.2779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
22.7036From_analysisRNASeq.briggsae.WBls:0000004.control_mean
25.4626From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002714.509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.56877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.99835From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.69204From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.1014From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.20445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.57014From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003516.3123From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.3501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
14.7249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.60445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.47376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
9.5383From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.91193From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004110.3987From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.7867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.47307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
8.54613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.66755From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.78896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.7878From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.8345From_analysisRNASeq.briggsae.WBls:0000041.control_mean
17.4022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
18.01From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006313.5562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.93996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.00739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.62755From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
8.98483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
9.02319From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.62942From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.63129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
8.95787From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001018.78896From_analysisRNASeq.briggsae.total_over_all_stages.control_median
9.98535From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.1856From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.17708From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00144198
00144199
00144200
00144201
00144202
00144203
00144204
Ortholog (34)
ParalogWBGene00039972Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042999Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and galactokinase activity. Predicted to be involved in carbohydrate phosphorylation and galactose metabolic process. Predicted to be located in cytoplasm. Is an ortholog of C. elegans tag-96.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22217
Corresponding_CDS_historyCBG22217:bp194
Corresponding_transcriptCBG22217.1
Other_sequence (22)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00040825_A
GPL14143_CBG22217_496-555_0.788_76_B
GPL14143_CBG22217_622-681_0.900_10_C
MethodGene