WormBase Tree Display for Gene: WBGene00040564

WBGene00040564 SMap: S_parent: Sequence: cb25.fpc4292a
  Identity: Version: 1
    Name: Sequence_name: CBG21892
      Molecular_name: CBG21892
        CBG21892.1
        CBP35492
      Other_name: CBG_21892 Accession_evidence: NDB HE600952
      Public_name: CBG21892
    DB_info: Database: NDB locus_tag CBG_21892
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:10 WBPerson1971 Event: Imported: Initial conversion from brigace
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 27.6512 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        35.4918 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        37.1279 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        41.6963 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        36.4894 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        38.305 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        39.4822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 111.247 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        124.987 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        97.5075 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        101.92 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        108.138 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 76.5904 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        78.4847 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        80.379 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        69.9851 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        71.5568 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        76.801 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        85.4938 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 1.23327 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        19.4299 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        6.87114 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        9.1781 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        13.1505 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        13.1705 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        25.1476 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 20.8924 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 21.3875 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        21.5501 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        23.4897 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        25.4294 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        30.8358 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        7.7348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 27.838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        49.6524 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        56.3988 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        56.6106 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        56.8225 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        57.5504 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        33.402 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        34.4388 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        44.4084 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        45.4188 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 25.1081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        25.4239 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        27.0509 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        28.2815 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        28.4201 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        35.4043 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        24.9387 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        26.2374 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        27.7243 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 27.838 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        36.837 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        28.7539 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        40.9115 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00143975
      00143976
      00143977
    Ortholog (29)
    Paralog (34)
    Structured_description: Automated_description: Predicted to enable branched-chain amino acid transmembrane transporter activity. Predicted to be involved in branched-chain amino acid catabolic process. Predicted to be located in mitochondrion. Is an ortholog of C. elegans F13G3.7. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG21892
    Corresponding_CDS_history: CBG21892:bp194
    Corresponding_transcript: CBG21892.1
    Other_sequence (32)
  Experimental_info: Expr_pattern: Expr1068322
    Microarray_results: GPL8303_CB6_WBGene00040564_A
      GPL14143_CBG21892_598-657_0.840_3_C
      GPL14143_CBG21892_639-698_0.682_57_B
      GPL14143_CBG21892_1046-1105_0.842_1_A
  Method: Gene