WormBase Tree Display for Gene: WBGene00040150

WBGene00040150 SMap: S_parent: Sequence: cb25.fpc4238
  Identity: Version: 3
    Name: CGC_name: Cbr-ears-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG21346
      Molecular_name: CBG21346
        CBG21346.1
        CBP05079
      Other_name: Cbr-ers-2 From_analysis: Inferred_from_orthology
        CBG_21346 Accession_evidence: NDB HE601293
      Public_name: Cbr-ears-1
    DB_info: Database: NDB locus_tag CBG_21346
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:10 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-ers-2
        3 29 Jan 2010 10:38:19 WBPerson2970 Name_change: CGC_name: Cbr-ears-1
                Other_name: Cbr-ers-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ears
    RNASeq_FPKM: WBls:0000002 61.5457 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        71.5124 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        73.5158 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        87.4892 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        38.8263 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        64.8434 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        66.5291 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 69.5717 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        74.3264 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        79.0811 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        64.0407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        70.8978 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 54.7466 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        55.2485 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        55.7503 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        52.6328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        56.3863 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        59.0393 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        59.7624 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 20.8854 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        32.8793 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        7.01916 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        70.7335 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        43.392 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        45.8094 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        74.9301 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 85.9677 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 102.192 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        102.631 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        35.6271 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        69.1553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        77.4014 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        85.6737 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
      WBls:0000041 103.569 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        109.753 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        112.527 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        78.0836 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        97.3858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        99.4373 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        80.4904 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        82.9072 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        90.1465 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        93.5245 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 125.181 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        67.1183 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        69.8704 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        76.6136 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        79.1729 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        83.5912 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        72.7 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        74.6568 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        81.776 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 72.4253 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        72.8239 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        70.6753 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        72.1062 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00143661
      00143662
      00143663
      00143664
      00143665
      00143666
      00143667
      00143668
      00143669
    Ortholog (33)
    Paralog: WBGene00034299 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034482 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and glutamate-tRNA ligase activity. Predicted to be involved in glutamyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Is an ortholog of C. elegans ears-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG21346
    Corresponding_CDS_history: CBG21346:bp194
    Corresponding_transcript: CBG21346.1
    Other_sequence (82)
  Experimental_info: Expr_pattern: Expr1068018
    Microarray_results: GPL8303_CB6_WBGene00040150_A
      GPL14143_CBG21346_2905-2964_0.930_2_B
      GPL14143_CBG21346_3005-3064_0.927_3_C
      GPL14143_CBG21346_3102-3161_0.936_1_A
    Expression_cluster: WBPaper00051425:CB_L1_vs_embryo_downregulated
  Method: Gene