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WormBase Tree Display for Gene: WBGene00039963

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Name Class

WBGene00039963SMapS_parentSequencecb25.fpc4224a
IdentityVersion1
NameSequence_nameCBG21099
Molecular_nameCBG21099
CBG21099.1
CBP05021
Other_nameCBG_21099Accession_evidenceNDBHE600975
Public_nameCBG21099
DB_infoDatabaseNDBlocus_tagCBG_21099
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00129709
WBVar00129711
WBVar00129712
WBVar00129707
WBVar00129708
RNASeq_FPKMWBls:0000002215.554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
226.655From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
261.845From_analysisRNASeq.briggsae.WBls:0000002.control_mean
343.327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
148.733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
221.105From_analysisRNASeq.briggsae.WBls:0000002.control_median
233.567From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.329894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.504448From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.679003From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.18285From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.53966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.994995From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.98999From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.27067From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.588361From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.681144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002715.2631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
38.0155From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
49.3816From_analysisRNASeq.briggsae.WBls:0000027.control_mean
94.8663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
112.168From_analysisRNASeq.briggsae.WBls:0000027.control_mean
300.527From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
66.4409From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035352.637From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038180.382From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
194.839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
244.274From_analysisRNASeq.briggsae.WBls:0000038.control_mean
246.465From_analysisRNASeq.briggsae.WBls:0000038.control_median
298.092From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
303.784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004138.3888From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
39.1855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
39.5339From_analysisRNASeq.briggsae.WBls:0000041.control_median
39.8822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
40.2127From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.3944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
29.0985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
40.1754From_analysisRNASeq.briggsae.WBls:0000041.control_mean
51.1033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063195.164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
198.341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
213.847From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
226.424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
244.685From_analysisRNASeq.briggsae.WBls:0000063.control_mean
389.648From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
160.363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
206.094From_analysisRNASeq.briggsae.WBls:0000063.control_median
230.631From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101166.223From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
194.839From_analysisRNASeq.briggsae.total_over_all_stages.control_median
145.1From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
150.648From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (34)
ParalogWBGene00039962Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00040752Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Immunoglobulin E-set. Is an ortholog of C. elegans F42A10.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21099
Corresponding_CDS_historyCBG21099:bp194
Corresponding_transcriptCBG21099.1
Other_sequence (28)
Experimental_infoExpr_patternExpr1067447
Microarray_resultsGPL8303_CB6_WBGene00039963_A
GPL8303_CB6_WBGene00039963_B
GPL14143_CBG21099_202-261_0.951_1_A
MethodGene