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WormBase Tree Display for Gene: WBGene00039891

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Name Class

WBGene00039891SMapS_parentSequencecb25.fpc4206c
IdentityVersion2
NameCGC_nameCbr-eat-2From_analysisInferred_from_orthology
Sequence_nameCBG21000
Molecular_nameCBG21000
CBG21000.1
CBP37967
Other_nameCBG_21000Accession_evidenceNDBHE600928
Public_nameCbr-eat-2
DB_infoDatabaseNDBlocus_tagCBG_21000
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-eat-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classeat
Allele (14)
RNASeq_FPKMWBls:00000020.15775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.228214From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.401212From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.817672From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.029232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.192982From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.308217From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.10938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
1.33273From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.55608From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.350134From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.0052From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.552942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.803481From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.05402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.763567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.900589From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.914106From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.29941From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (11)
WBls:00000270.30608From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.918241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.235629From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.347375From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.471258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.499986From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.501986From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.640018From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.654417From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.668816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.699109From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.132499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.141202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.193953From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.194672From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.246705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.258282From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.239664From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.247384From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.248062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.411232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.161984From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.341031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.46889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.156509From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.187156From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.313017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.362319From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.506914From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.386775From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.512816From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143372
00143373
00143374
00143375
00143376
00143377
00143378
00143379
Ortholog (28)
Paralog (104)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans eat-2. In C. elegans, eat-2 is involved in several processes, including feeding behavior; regulation of eating behavior; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21000
Corresponding_CDS_historyCBG21000:bp239
Corresponding_transcriptCBG21000.1
Other_sequenceFE913808.1
ASC34037_1
JI253743.1
Experimental_infoExpr_patternExpr1060492
Microarray_resultsGPL8303_CB6_WBGene00039891_A
GPL8303_CB6_WBGene00039891_B
GPL14143_CBG21000_625-684_0.782_22_C
GPL14143_CBG21000_727-786_0.772_34_B
GPL14143_CBG21000_1272-1331_0.830_1_A
MethodGene