WormBase Tree Display for Gene: WBGene00039864

WBGene00039864 SMap: S_parent: Sequence: cb25.fpc4206c
  Identity: Version: 2
    Name: CGC_name: Cbr-pitr-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBG20968
      Molecular_name: CBG20968
        CBG20968.1
        CBP26239
      Other_name: CBG_20968 Accession_evidence: NDB HE600928
      Public_name: Cbr-pitr-6
    DB_info: Database: NDB locus_tag CBG_20968
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:09 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 30 Aug 2012 15:20:40 WBPerson2970 Name_change: CGC_name: Cbr-pitr-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pitr
    RNASeq_FPKM: WBls:0000002 0.051027 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.091551 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.223625 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.087658 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.099735 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.124289 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.294874 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.589747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.320454 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.371616 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 6.10924 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        6.55377 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        6.9983 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        4.43299 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        5.00737 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        5.30683 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        5.57095 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 0.064203 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.075701 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.09238 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.10906 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.114584 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.209372 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.065223 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.195668 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.097834 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.182528 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.534443 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.027978 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.026336 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.068186 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.068227 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.110117 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.13629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.017606 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.018185 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.018763 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.019179 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.040347 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.021525 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.024286 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.037118 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.121707 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.094816 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.098629 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.37545 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.023721 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.047442 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.08692 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.040347 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.533705 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.069952 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.82759 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00143336
      00143337
      00143338
    Contained_in_operon: CBOPA0487
    Ortholog (38)
    Paralog: WBGene00028227 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038370 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038466 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038578 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans pitr-6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG20968
    Corresponding_CDS_history: CBG20968:bp194
    Corresponding_transcript: CBG20968.1
  Experimental_info: Expr_pattern: Expr1067302
    Microarray_results: GPL8303_CB6_WBGene00039864_A
      GPL8303_CB6_WBGene00039864_B
      GPL14143_CBG20968_1043-1102_0.697_66_C
      GPL14143_CBG20968_1252-1311_0.583_140_B
      GPL14143_CBG20968_1361-1420_0.813_1_A
  Method: Gene