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WormBase Tree Display for Gene: WBGene00039760

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Name Class

WBGene00039760SMapS_parentSequencecb25.fpc4206c
IdentityVersion1
NameSequence_nameCBG20848
Molecular_nameCBG20848a
CBG20848a.1
CBP11590
CBG20848b
CBP38807
CBG20848b.1
Other_nameCBG_20848Accession_evidenceNDBHE600928
Public_nameCBG20848
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:09WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000215.9284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
16.6101From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
17.2029From_analysisRNASeq.briggsae.WBls:0000002.control_mean
19.0702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
17.58From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.6608From_analysisRNASeq.briggsae.WBls:0000002.control_median
18.7115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000312.5429From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
6.91242From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.72766From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
11.5651From_analysisRNASeq.briggsae.WBls:0000003.control_mean
15.2401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000411.9753From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
16.2379From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
20.5004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
12.7065From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
13.9412From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.5259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.99792From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.5528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.8645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.98467From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.80066From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.1256From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.2665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.91712From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003515.8079From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003813.9503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
17.0821From_analysisRNASeq.briggsae.WBls:0000038.control_median
17.4652From_analysisRNASeq.briggsae.WBls:0000038.control_mean
20.2139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
28.0775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
7.61889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004115.7008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
22.4996From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
22.8062From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.0214From_analysisRNASeq.briggsae.WBls:0000041.control_median
25.5431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
27.4814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
18.7187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
22.2891From_analysisRNASeq.briggsae.WBls:0000041.control_mean
23.1454From_analysisRNASeq.briggsae.WBls:0000041.control_median
23.7912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006315.0292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
17.628From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.8537From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
18.8875From_analysisRNASeq.briggsae.WBls:0000063.control_mean
20.0797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
22.8469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
19.4667From_analysisRNASeq.briggsae.WBls:0000063.control_median
19.7775From_analysisRNASeq.briggsae.WBls:0000063.control_mean
24.2274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010116.4398From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
16.6101From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.4383From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.6037From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00143218
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to enable S-adenosylmethionine-dependent methyltransferase activity. Is an ortholog of C. elegans K09E4.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG20848a
CBG20848b
Corresponding_CDS_historyCBG20848:bp194
Corresponding_transcriptCBG20848a.1
CBG20848b.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1060072
Microarray_resultsGPL8303_CB6_WBGene00039760_A
GPL8303_CB6_WBGene00039760_B
GPL14143_CBG20848_496-555_0.826_16_A
GPL14143_CBG20848_697-756_0.835_11_B
GPL14143_CBG20848_717-776_0.818_25_C
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene